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4 - The Simulation Pipeline
4.1 - Gene Expression
4.2 - Reverse Transcription
4.3 - Fragmentation
4.4 - Final Library Preparation
4.5 - Sequencing
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4 - The Simulation Pipeline
Created by
Micha Sammeth
, last modified on
May 25, 2012
4.1 - Gene Expression
4.1.1 - Gene Expression Profile
4.1.2 - Transcript Modifications
4.2 - Reverse Transcription
4.3 - Fragmentation
4.3.1 - RNA Hydrolysis
4.3.2 - DNA Nebulization
4.3.3 - DNA Digestion
4.4 - Final Library Preparation
4.4.1 - Size Selection
4.4.2 - PCR Amplification
4.5 - Sequencing
4.5.1 - The Sequencing Process
4.5.2 - Read Identifiers
4.5.3 - Output Read Sequences
4.5.4 - Error Models
4.5.5 - Uniformity Measurements
Recently Updated
2 - Download
Dec 13, 2018
•
updated by
Micha Sammeth
•
view change
5.3 Poly-dT Priming and DNAse Digestion (S.cerevisiae)
Nov 28, 2018
•
updated by
Micha Sammeth
•
view change
1.0.1 Release notes
Aug 27, 2018
•
updated by
Micha Sammeth
•
view change
1.0.2 Release notes
Aug 27, 2018
•
updated by
Micha Sammeth
•
view change
1.0.3 Release Notes
Aug 27, 2018
•
updated by
Micha Sammeth
•
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1.1 Release Notes
Aug 27, 2018
•
updated by
Micha Sammeth
•
view change
1.2 Release Notes
Aug 27, 2018
•
updated by
Micha Sammeth
•
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1.2.1 Release Notes
Aug 27, 2018
•
updated by
Micha Sammeth
•
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D.1 - General Questions
May 29, 2018
•
commented by
Micha Sammeth
D.1 - General Questions
May 25, 2018
•
commented by
Yuande Tan
3.2 - Starting the Flux Simulator
May 25, 2018
•
commented by
Yuande Tan
FPKM from PRO
Aug 07, 2017
•
created by
Deepak Grover
Stil an error while preparing sequences
Jun 22, 2017
•
commented by
Vitor Lima Coelho
I followed the paramater file and useage ,the error that java nullpointerexception occurred.
Jun 22, 2017
•
commented by
Vitor Lima Coelho
I followed the paramater file and useage ,the error that java nullpointerexception occurred.
Jun 22, 2017
•
created by
longyuqi
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