Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.
Section

The format of LIB (Simulated Library) files is simple and condenses the information needed to describe a fragment (RNA or cDNA) of an original transcripts. Each line corresponds to one such fragments and in 3 tab-delimited fields the estart, eend in the spliced sequence (exonic) of the transcript with transcript_id of the original annotation.

Section

Note: because the simuated transcription start and length of the poly-A tail may vary from the annotation in the reference, values for estart can drop below , and values for eend can take values higher than the transcript length.

 

Example