Versions Compared

Old Version 1

changes.mady.by.user Micha Sammeth

Saved on

compared with

New Version Current

changes.mady.by.user Micha Sammeth

Saved on

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

Flux Version

Flux - Capacitor v11.2.3 (Flux Library: 1.20)

Read Mappings

Tophat mappings were employed, filtered for primary alignments (mapper comparison) by samtools

samtools view -bF 256 file.bam > filtered_file.bam

Annotation File

The quantifications are based on a modified Gencode (v12) version annotation created at the Broad Institute:

...