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Section

Output: Columnn 1-6 of the PRO_FILE, i.e., (1) locus name, (2) transcript identifier, (3) coding flag, (4) length of the processed transcript, (5) relative fraction  and (6) absolute number of the transcript species in the initial RNA extraction.

Warning
Image AddedAlthough the Simulator program currently allows to set parameter EXPRESSION_K to a value of "0", please note that such settings remove the power-law distribution we ususally observe in cellular transcriptomes. Below a boxplot representation of the distribution of the simulated number of molecules for all transcripts in a reference annotation when EXPRESSION_K is set to "0", the distribution exhibits a mean of ~15 and a standard deviation of ~5.