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  • 3.3 - Tool SCORER (Splice Site Scoring)

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  1. R. Guigó, "Assembling genes from predicted exons in linear time with dynamic programming", Journal of Computational Biology, 5:681-702 (1998).
  2. R. Guigó, S. Knudsen, N. Drake, and T. F. Smith, "Prediction of gene structure", Journal of Molecular Biology, 226:141-157 (1992).
  3. E. Blanco, G. Parra and R. Guigó, "Using geneid to Identify Genes.", In Current Protocols in Bioinformatics. Unit 4.3. (A. Baxevanis, editor) John Wiley & Sons Inc., New York (2002)
  4. G. Parra, E. Blanco, and R. Guigó, "Geneid in Drosophila", Genome Research 10(4):511-515 (2000).

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Examples

Scoring Splice Sites of a given annotation employing the default model (i.e., human)

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