Date: Thu, 28 Mar 2024 17:05:19 +0100 (CET) Message-ID: <189692374.2783.1711641919341@localhost> Subject: Exported From Confluence MIME-Version: 1.0 Content-Type: multipart/related; boundary="----=_Part_2782_1628140170.1711641919339" ------=_Part_2782_1628140170.1711641919339 Content-Type: text/html; charset=UTF-8 Content-Transfer-Encoding: quoted-printable Content-Location: file:///C:/exported.html
Hi,
I have sequenced many RNA paired-end reads, and mapped to genome referen=
ce sequence, and now I want to know whether the read is mapped correctly. A=
nd from the read identifier, for example: c=
hr1:
4847775
-4887990W:NM_001159750:
1
:
2668
:
917
:
1137
:S/
2, I know this read is=
come from the range [4847775,4887990],and the se=
gment range is [917,1137], but I am still no=
t clear how to get the exact genomic start position of the read? Is it poss=
ible to get it from the read identifier? If not, is there a way to get the =
exact genomic start position of a read? Thank you very much.